"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T), and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.
Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).
| IGHV
subgroup |
IGHV
gene name (1) |
Fct | R | T | Pr | Reference sequences | Accession numbers | Sequences from the literature |
| 1 | IGHV1S1 | (F) | + | + | AJ296096 [1](2) #c |
IMGT notes:
| (1) | Turbot (Scophthalmus maximus) genes are designated by a number for the subgroup, following by the letter S and a number. |
| (2) | Partial V-REGION: AA 1 to 48 are missing (no FR1-IMGT, no CR1-IMGT and partial FR2-IMGT). |
Reference:
| [1] | Low, C. A. et al., unpublished (2001). |
Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.
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