IMGT Repertoire (IG and TR)
1. Locus and genes
- Chromosomal localizations
- Locus representations
- Locus description
- Gene positions
- Gene exon/intron organization
- Gene exon/intron splicing sites
- Gene tables
- Potential germline repertoires
- Lists of human IG and TR genes, groups, loci and orphons
- Lists of Mouse (Mus musculus) IG and TR genes, groups and loci
- Clans
- Correspondence between nomenclatures
- Correspondence between species
Chromosomal localizations
IG and TR loci: Positions on chromosomes
Locus representations
Locus description
Gene positions
IMGT Genes on the Ensembl Genome Browser.
Gene exon/intron organization
Gene exon/intron splicing sites
Gene tables
IG and TR number of genes: Human
Recombination signal sequence logos:
Human,
Mouse
-
IGHV: Human,
Mouse,
Pig,
Teleostei,
Chondrichthyes,
Camel,
Llama,
Caiman,
Sheep,
Lungfish,
Frog,
Rat,
Rabbit
IGHD: Human, Mouse, Teleostei, Chondrichthyes, Pig, Rat, Rabbit
IGHJ: Human, Mouse, Teleostei, Chondrichthyes, Llama, Sheep, Pig, Rat, Rabbit
IGHC: Human, Mouse, Sheep, Bovine, Pig, Possum, Opossum, Camel, Teleostei, Chondrichthyes, Horse, Dog, Rat, Primates, Lungfish, Rabbit
- IGKV: Human,
Mouse,
Rabbit,
Possum,
Sheep
IGKJ: Human, Mouse, Rabbit, Possum, Sheep
IGKC: Human, Mouse, Rabbit - IGLV: Human,
Mouse,
Rat,
Possum,
Sheep
IGLJ: Human, Mouse, Possum, Sheep, Rabbit, Rat
IGLC: Human, Mouse Rabbit, Rat - IGIV: Teleostei,
Chondrichthyes
IGIJ: Teleostei, Chondrichthyes
IGIC: Teleostei
- TRAV: Human,
Mouse,
Teleostei,
Goat,
Axolotl,
Primates
TRAJ: Human, Mouse, Chicken, Primates, Pig , Teleostei
TRAC: Human, Mouse, Teleostei - TRBV: Human,
Mouse,
Goat,
Frog,
Primates,
Teleostei,
Dog
TRBD: Human, Mouse, Frog, Teleostei, Dog
TRBJ: Human, Mouse, Frog, Primates, Teleostei, Dog
TRBC: Human, Mouse, Dog
- TRGV: Human,
Mouse,
Sheep,
Bovine,
Dog
TRGJ: Human, Mouse, Sheep, Bovine, Dog
TRGC: Human, Mouse, Sheep, Bovine, Dog
- TRDV: Human,
Mouse
TRDD: Human, Mouse
TRDJ: Human, Mouse, Pig
TRDC: Human, Mouse
Potential germline repertoires
Lists of human Homo sapiens IG and TR genes, groups, loci and orphons and links between IMGT/GENE-DB, HGNC, Entrez Gene, GDB, GenAtlas and GeneCards
Lists of Mouse (Mus musculus) IG and TR genes, groups and loci and links between IMGT/GENE-DB, MGD, Entrez Gene, GenAtlas and GeneCards
- TR genes: Mouse
Clans (IMGT Index)
- Clan
- IGHV, IGKV and IGLV clans for Homo sapiens and Mus musculus
- IGHV clans for Homo sapiens and Mus musculus
- IGKV clans for Homo sapiens and Mus musculus
- IGLV clans for Homo sapiens and Mus musculus
Correspondence between nomenclatures
Correspondence between species
- IGHV: Mouse and human
- IGKV: Mouse and human
- IGLV: Mouse and human
- TRBV: Mouse and human
Last updated: Thursday, 11-Mar-2010 22:00:05 CET
Editor: Chantal Ginestoux
Contact: Marie-Paule Lefranc
Software material and data coming from IMGT server may be used for academic research only,
provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics
information system® http://www.imgt.org
(founder and director: Marie-Paule Lefranc, Montpellier, France)."
References to cite:
Lefranc, M.-P. et al.,
Nucleic Acids Research, 27, 209-212 (1999)
Cover of NAR;
Ruiz, M. et al.,
Nucleic Acids Research, 28, 219-221 (2000);
Lefranc, M.-P.,
Nucleic Acids Research, 29, 207-209 (2001);
Lefranc, M.-P.,
Nucleic Acids Res., 31, 307-310 (2003);
Lefranc, M.-P. et al.,
In Silico Biol., 5, 0006 (2004) [Epub],
5, 45-60 (2005);
Lefranc, M.-P. et al.,
Nucleic Acids Res., 33, D593-D597 (2005)
Full text;
Lefranc, M.-P. et al.,
Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838
Full text.
For any other use please contact Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr.
IMGT founder and director: Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
Bioinformatics manager: Véronique Giudicelli
Veronique.Giudicelli@igh.cnrs.fr
Computer manager: Patrice Duroux
Patrice.Duroux@igh.cnrs.fr
Webmaster: Chantal Ginestoux
Chantal.Ginestoux@igh.cnrs.fr
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